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HUMAN BACE (BETA SECRETASE) IN COMPLEX WITH CYCLOHEXANECARBOXYLIC ACID (2-(2-AM INO-6-PHENOXY-4H-QUINAZOLIN-3-YL)-2-CYCLOHEXYL-ETHYL)-AMIDE
Biology and Chemistry Report
2WJO
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE
    Text ZYMOGEN, MEMBRANE, HYDROLASE, GLYCOPROTEIN, TRANSMEMBRANE

    Polymeric Molecules

    Chain A
    Description BETA-SECRETASE 1 
    Fragment RESIDUES 58-460 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 45992.2 
    Source Method genetically manipulated  
    Entity Name BETA SECRETASE, BETA-SITE AMYLOID PRECURSOR PROTEIN CLEAVING ENZYME 1, BETA-SITE APP CLEAVING ENZYME 1, MEMBRANE-ASSOCIATED ASPARTIC PROTEASE 2, MEMAPSIN-2, ASPARTYL PROTEASE 2, ASP 2, ASP2 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    QUD  2-AMINO-3-{(1R)-1-CYCLOHEXYL-2-[(CYCLOHEXYLCARBONYL)AMINO]ETHYL}-6-PHENOXYQUINAZOLIN-3-IUM  C29 H37 N4 O2   473.63  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A BACE1_HUMAN A0M8W7     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    3.4.23.46      
     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Host Common Name Fruit Flies
    Host Scientific Name Drosophila  


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    11 11q23.2-q23.3 23621     beta-site APP-cleaving enzyme 1 BACE1    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs17857093 LS-SNP   dbSNP   A 57 S - > F Coil 8% (Buried) 11 117166061
    rs138138981 LS-SNP   dbSNP   A 61 R - > Q Beta Ladder 64% (Exposed) 11 117166049
    rs200733909 LS-SNP   dbSNP   A 64 R - > W Beta Ladder 89% (Exposed) 11 117166041
    rs151257620 LS-SNP   dbSNP   A 88 P - > T Turn 38% (Exposed) 11 117165969
    rs200695125 LS-SNP   dbSNP   A 171 G - > R Beta Ladder 19% (Intermediate) 11 117164598
    rs201550686 LS-SNP   dbSNP   A 182 S - > W 3/10 Helix 55% (Exposed) 11 117163882
    rs145565779 LS-SNP   dbSNP   A 202 I - > V Coil 2% (Buried) 11 117163823
    rs28989503 LS-SNP   dbSNP   A 204 V - > A Beta Ladder 8% (Buried) 11 117163816
    rs140050693 LS-SNP   dbSNP   A 211 Q - > H Beta Ladder 61% (Exposed) 11 117163794
    rs149860623 LS-SNP   dbSNP   A 274 T - > S Coil 46% (Exposed) 11 117161704
    rs139977300 LS-SNP   dbSNP   A 328 S - > P Bend 90% (Exposed) 11 117161303