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CRYSTAL STRUCTURE OF HEPATITIS C VIRUS NS5B POLYMERASE FROM 1B GENOTYPE IN COMPLEX WITH A NON-NUCLEOSIDE INHIBITOR
Biology and Chemistry Report
2WHO
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSFERASE
    Text TRANSFERASE, RNA REPLICATION, ENVELOPE PROTEIN, HEPATITIS C VIRUS, ENDOPLASMIC RETICULUM, NON NUCLEOSIDE INHIBITOR, VIRAL PROTEIN, METAL-BINDING, TRANSMEMBRANE, POLYMERASE, ATP-BINDING, GENOTYPE 1B, RNA-BINDING, RNA-DEPENDENT RNA POLYMERASE, NNI, HCV, NS5B, MEMBRANE, HELICASE, HYDROLASE, NUCLEOTIDE-BINDING, ALLOSTERIC INHIBITOR, RNA-DIRECTED RNA POLYMERASE

    Polymeric Molecules

    Chain A,B
    Description RNA-DIRECTED RNA POLYMERASE 
    Fragment NS5B, RESIDUES 2420-2955 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 59642.1 
    Source Method genetically manipulated  
    Entity Name NS5B, P68 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    MN  MANGANESE (II) ION  Mn   54.94  View 
    VGI  2-(3-BROMOPHENYL)-6-[(2-HYDROXYETHYL)AMINO]-1H-BENZO[DE]ISOQUINOLINE-1,3(2H)-DIONE  C20 H15 Br N2 O3   411.25  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B POLG_HCVBK P26663     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B  2.7.7.48      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    39694   Viral RNA Genome Replication  The Replication of a Viral RNA Genome. 
    3723   RNA Binding  Interacting Selectively and Non Covalently with an RNA Molecule or a Portion Thereof. 
    3968   RNA Directed RNA Polymerase Activity  Catalysis of the Reaction: Nucleoside Triphosphate + Rna(n) = Diphosphate + Rna(n+1); Uses an RNA Template. 


    Protein Analyses

    Measured Binding Affinities   

     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Scientific Name Hepatitis c virus  
    Strain ISOLATE BK
    Variant Genotype 1b
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector T7
    Host Plasmid Name PT7.7
    Description Genbank Accession Number Ab016785