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CRYSTAL STRUCTURE OF ANTI-APOPTOTIC BHRF1 IN COMPLEX WITH THE BIM BH3 DOMAIN
Biology and Chemistry Report
2WH6
  •   Structure Details   Hide

    Structure Keywords

    Keywords APOPTOSIS
    Text MITOCHONDRION, EARLY PROTEIN, TRANSMEMBRANE, VIRAL PROTEIN, APOPTOSIS

    Polymeric Molecules

    Chain A
    Description EARLY ANTIGEN PROTEIN R 
    Fragment BCL-2, RESIDUES 1-160 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 19848.5 
    Source Method genetically manipulated  
    Entity Name NUCLEAR ANTIGEN, EA-R, BHRF1 
    Chain B
    Description BCL-2-LIKE PROTEIN 11 
    Fragment BH3, RESIDUES 51-72 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 3274.7 
    Source Method synthetic  
    Entity Name BCL2-L-11, BCL2-INTERACTING MEDIATOR OF CELL DEATH, BIM 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    BR  BROMIDE ION  Br   79.90  View 
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A EAR_EBVA8 P0C6Z1     
    B B2L11_HUMAN A8K2W2     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    42981   Regulation of Apoptotic Process  Any Process That Modulates the Occurrence or Rate of Cell Death by Apoptotic Process. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Scientific Name Human herpesvirus 4  
    Strain AG876
    Host Scientific Name Escherichia coli  
    Host Variant De3
    Host Strain Bl21
    Host Plasmid Name PDUET


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    2 2q13 10018     BCL2-like 11 (apoptosis facilitator) BCL2L11    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs114585494 LS-SNP   dbSNP   B 52 M - > R Coil 40% (Exposed) 2 111907651
    rs141962978 LS-SNP   dbSNP   B 53 R - > H Helix 79% (Exposed) 2 111907654
    rs146318804 LS-SNP   dbSNP   B 63 R - > W Helix 13% (Intermediate) 2 111907683