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HUMAN BCL2-A1 IN COMPLEX WITH BIM-BH3 PEPTIDE
Biology and Chemistry Report
2VM6
  •   Structure Details   Hide

    Structure Keywords

    Keywords IMMUNE SYSTEM
    Text B-CELL LYMPHOMA2, ANTIAPOPTOTIC, IMMUNE SYSTEM, BIM, BFL-1, BCL2A1, BCL-2A1, MEMBRANE, APOPTOSIS

    Polymeric Molecules

    Chain A
    Description BCL-2-RELATED PROTEIN A1 
    Fragment RESIDUES 1-149 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 17246.8 
    Source Method genetically manipulated  
    Entity Name PROTEIN BFL-1, HEMOPOIETIC-SPECIFIC EARLY RESPONSE PROTEIN, PROTEIN GRS, BCL-2A1, A1 
    Chain B
    Description BCL-2-LIKE PROTEIN 11 
    Fragment RESIDUES 141-165 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 3117.5 
    Source Method genetically manipulated  
    Entity Name BCL2-INTERACTING MEDIATOR OF CELL DEATH 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    SO4  SULFATE ION  O4 S   96.06  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A B2LA1_HUMAN Q16548     
    B B2L11_HUMAN A8K2W2     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain B
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3) R3 Prare
    Host Plasmid Name PNIC-BSA4


    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3) R3 Prare
    Host Plasmid Name PNIC-BSA4


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    2 2q13 10018     BCL2-like 11 (apoptosis facilitator) BCL2L11    
    15 15q24.3 597     BCL2-related protein A1 BCL2A1    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs1138357 LS-SNP   dbSNP   A 19 C - > Y Helix 27% (Intermediate) 15 80263406
    rs199684962 LS-SNP   dbSNP   A 22 Q - > R Turn 85% (Exposed) 15 80263397
    rs138003376 LS-SNP   dbSNP   A 35 R - > K Helix 62% (Exposed) 15 80263358
    rs1138358 LS-SNP   dbSNP   A 39 N - > K Helix 80% (Exposed) 15 80263345
    rs199751349 LS-SNP   dbSNP   A 41 A - > V Helix 0% (Buried) 15 80263340
    rs141166047 LS-SNP   dbSNP   A 58 N - > S Turn 74% (Exposed) 15 80263289
    rs3826007 LS-SNP   dbSNP   A 82 G - > D Bend 80% (Exposed) 15 80263217
    rs142667711 LS-SNP   dbSNP   A 99 L - > V Helix 0% (Buried) 15 80263167
    rs138123718 LS-SNP   dbSNP   A 105 R - > Q Helix 89% (Exposed) 15 80263148
    rs143571009 LS-SNP   dbSNP   A 110 P - > L Coil 79% (Exposed) 15 80263133
    rs34080999 LS-SNP   dbSNP   A 117 E - > D Helix 46% (Exposed) 15 80263111
    rs150435550 LS-SNP   dbSNP   A 119 S - > A Helix 0% (Buried) 15 80263107
    rs11555732 LS-SNP   dbSNP   A 120 Y - > F Helix 50% (Exposed) 15 80263103
    rs114585494 LS-SNP   dbSNP   B 142 M - > R Coil 40% (Exposed) 2 111907651
    rs141962978 LS-SNP   dbSNP   B 143 R - > H Coil 54% (Exposed) 2 111907654
    rs146318804 LS-SNP   dbSNP   B 153 R - > W Helix 28% (Intermediate) 2 111907683