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An Information Portal to 105097 Biological Macromolecular Structures

HUMAN BCL2-A1 IN COMPLEX WITH BIM-BH3 PEPTIDE
Biology and Chemistry Report
2VM6
  •   Structure Details   Hide

    Structure Keywords

    Keywords IMMUNE SYSTEM
    Text B-CELL LYMPHOMA2, ANTIAPOPTOTIC, IMMUNE SYSTEM, BIM, BFL-1, BCL2A1, BCL-2A1, MEMBRANE, APOPTOSIS

    Polymeric Molecules

    Chain A
    Description BCL-2-RELATED PROTEIN A1 
    Fragment RESIDUES 1-149 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 17246.8 
    Source Method genetically manipulated  
    Entity Name PROTEIN BFL-1, HEMOPOIETIC-SPECIFIC EARLY RESPONSE PROTEIN, PROTEIN GRS, BCL-2A1, A1 
    Chain B
    Description BCL-2-LIKE PROTEIN 11 
    Fragment RESIDUES 141-165 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 3117.5 
    Source Method genetically manipulated  
    Entity Name BCL2-INTERACTING MEDIATOR OF CELL DEATH 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    SO4  SULFATE ION  O4 S   96.06  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A B2LA1_HUMAN Q16548     
    B B2L11_HUMAN A8K2W2     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    42981   Regulation of Apoptotic Process  Any Process That Modulates the Occurrence or Rate of Cell Death by Apoptotic Process. 
    43066   Negative Regulation of Apoptotic Process  Any Process That Stops Prevents or Reduces the Frequency Rate or Extent of Cell Death by Apoptotic Process. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain B
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3) R3 Prare
    Host Plasmid Name PNIC-BSA4


    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3) R3 Prare
    Host Plasmid Name PNIC-BSA4


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    2 2q13 10018     BCL2-like 11 (apoptosis facilitator) BCL2L11    
    15 15q24.3 597     BCL2-related protein A1 BCL2A1    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs1138357 LS-SNP   dbSNP   A 19 C - > Y Helix 27% (Intermediate) 15 80263406
    rs199684962 LS-SNP   dbSNP   A 22 Q - > R Turn 85% (Exposed) 15 80263397
    rs138003376 LS-SNP   dbSNP   A 35 R - > K Helix 62% (Exposed) 15 80263358
    rs1138358 LS-SNP   dbSNP   A 39 N - > K Helix 80% (Exposed) 15 80263345
    rs199751349 LS-SNP   dbSNP   A 41 A - > V Helix 0% (Buried) 15 80263340
    rs141166047 LS-SNP   dbSNP   A 58 N - > S Turn 74% (Exposed) 15 80263289
    rs3826007 LS-SNP   dbSNP   A 82 G - > D Bend 80% (Exposed) 15 80263217
    rs142667711 LS-SNP   dbSNP   A 99 L - > V Helix 0% (Buried) 15 80263167
    rs138123718 LS-SNP   dbSNP   A 105 R - > Q Helix 89% (Exposed) 15 80263148
    rs143571009 LS-SNP   dbSNP   A 110 P - > L Coil 79% (Exposed) 15 80263133
    rs34080999 LS-SNP   dbSNP   A 117 E - > D Helix 46% (Exposed) 15 80263111
    rs150435550 LS-SNP   dbSNP   A 119 S - > A Helix 0% (Buried) 15 80263107
    rs11555732 LS-SNP   dbSNP   A 120 Y - > F Helix 50% (Exposed) 15 80263103
    rs114585494 LS-SNP   dbSNP   B 142 M - > R Coil 40% (Exposed) 2 111907651
    rs141962978 LS-SNP   dbSNP   B 143 R - > H Coil 54% (Exposed) 2 111907654
    rs146318804 LS-SNP   dbSNP   B 153 R - > W Helix 28% (Intermediate) 2 111907683