POP-OUT | CLOSE

An Information Portal to 105097 Biological Macromolecular Structures

X-RAY STRUCTURE OF A NF-KB P50-RELB-DNA COMPLEX
Biology and Chemistry Report
2V2T
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSCRIPTION
    Text 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL, AQUIFEX AEOLICUS, NUCLEOTIDE-BINDING, ISOPRENE BIOSYNTHESIS, TRANSCRIPTION, KINASE, TRANSFERASE, ATP-BINDING, NON-MEVALONATE

    Polymeric Molecules

    Chain A
    Description TRANSCRIPTION FACTOR RELB 
    Fragment RESIDUES 91-378 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 32604.4 
    Source Method genetically manipulated  
    Entity Name RELB 
    Chain B
    Description NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT 
    Fragment NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT, RESIDUES 38-363 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 36713.2 
    Source Method genetically manipulated  
    Entity Name DNA-BINDING FACTOR KBF1, EBP-1, NF-KAPPA-B1 P84/NF-KAPPA-B1 P98, P50 
    Chain C,D
    Description 5'-D(*CP*GP*GP*GP*AP*AP*TP*TP*CP*CP*CP)-3' 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 3334.2 
    Source Method synthetic  

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A RELB_MOUSE Q04863     
    B NFKB1_MOUSE P25799     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    3700   Sequence Specific DNA Binding Transcription Factor Activity  Interacting Selectively and Non Covalently with a Specific DNA Sequence in Order to Modulate Transcription. the Transcription Factor May or May Not Also Interact Selectively with a Protein or Macromolecular Complex. 
    Chain B
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    3700   Sequence Specific DNA Binding Transcription Factor Activity  Interacting Selectively and Non Covalently with a Specific DNA Sequence in Order to Modulate Transcription. the Transcription Factor May or May Not Also Interact Selectively with a Protein or Macromolecular Complex. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain B
    Common Name Mouse
    Scientific Name Mus musculus  
    Cell Line Nf Kb1
    Host Scientific Name Escherichia coli  
    Host Strain Bl21


    Chain A
    Common Name Mouse
    Scientific Name Mus musculus  
    Cell Line Nf Kb1
    Host Scientific Name Escherichia coli  
    Host Strain Bl21


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    3 3 G3|3 62.82 cM 18033     nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 NFKB1    
    7 7 A3|7 9.93 cM 19698     avian reticuloendotheliosis viral (v-rel) oncogene related B RELB