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NMR structure of CCP modules 2-3 of complement factor H
Biology and Chemistry Report
2RLQ
  •   Structure Details   Hide

    Structure Keywords

    Keywords Immune system
    Text Complement, Factor H, Age-related macular degeneration, Immune system, cofactor activity, Complement alternate pathway, Disease mutation, Glycoprotein, Immune response, Innate immunity, Secreted, Sushi

    Polymeric Molecules

    Chain A
    Description Complement factor H 
    Fragment residues in database 84-206 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14183.8 
    Source Method genetically manipulated  
    Entity Name H factor 1 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A CFAH_HUMAN P08603     

     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Gene cfh, hf, hf1, hf2
    Host Scientific Name Pichia pastoris  
    Host Strain Km71h
    Host Vector Ppiczalphab
    Host Vector Type Vector


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1q32 3075     complement factor H CFH    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs121913058 LS-SNP   dbSNP   A 127 R - > L Beta Ladder 18% (Intermediate) 1 196645148
    rs147002633 LS-SNP   dbSNP   A 130 D - > N Beta Ladder 45% (Exposed) 1 196645156
    rs143609884 LS-SNP   dbSNP   A 144 V - > M Coil 1% (Buried) 1 196646608
    rs112293603 LS-SNP   dbSNP   A 145 K - > E Beta 30% (Intermediate) 1 196646611
    rs138800544 LS-SNP   dbSNP   A 149 V - > A Coil 17% (Intermediate) 1 196646624
    rs141852866 LS-SNP   dbSNP   A 158 V - > I Bend 50% (Exposed) 1 196646650
    rs146147358 LS-SNP   dbSNP   A 158 V - > A Bend 50% (Exposed) 1 196646651
    rs200751706 LS-SNP   dbSNP   A 174 V - > I Beta Ladder 0% (Buried) 1 196646698
    rs139360826 LS-SNP   dbSNP   A 175 R - > P Beta Ladder 57% (Exposed) 1 196646702
    rs189411907 LS-SNP   dbSNP   A 177 V - > A Beta Ladder 61% (Exposed) 1 196646708
    rs121913054 LS-SNP   dbSNP   A 189 E - > *K Beta Ladder 31% (Intermediate) 1 196646743
    rs146159006 LS-SNP   dbSNP   A 201 E - > G Coil 61% (Exposed) 1 196646780
    rs147638219 LS-SNP   dbSNP   A 201 E - > K Coil 61% (Exposed) 1 196646779