POP-OUT | CLOSE
 
A Mechanistic Basis for Converting a Receptor Tyrosine Kinase Agonist to an Antagonist
Biology and Chemistry Report
2QJ2
  •   Structure Details   Hide

    Structure Keywords

    Keywords HORMONE
    Text HGF/SF, HORMONE/GROWTH FACTOR, HORMONE

    Polymeric Molecules

    Chain A,B
    Description Hepatocyte growth factor 
    Fragment residues 28-209 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 21159.4 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    SO4  SULFATE ION  O4 S   96.06  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B HGF_HUMAN P14210     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Gene hgf, hpta
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Origami(de)
    Host Vector Type Plasmid
    Host Plasmid Name pET-Duet1


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    7 7q21.1 3082     hepatocyte growth factor (hepapoietin A; scatter factor) HGF    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs138927646 LS-SNP   dbSNP   A 43 K - > R Beta Ladder 4% (Buried) 7 81392149
    rs150267054 LS-SNP   dbSNP   A 46 A - > V Turn 47% (Exposed) 7 81392140
    rs142659098 LS-SNP   dbSNP   A 61 T - > N Beta Ladder 46% (Exposed) 7 81392095
    rs189052337 LS-SNP   dbSNP   A 93 R - > T Turn 52% (Exposed) 7 81388097
    rs151170133 LS-SNP   dbSNP   A 116 F - > Y Beta Ladder 17% (Intermediate) 7 81388028
    rs141389863 LS-SNP   dbSNP   A 130 I - > T Bend 53% (Exposed) 7 81386598
    rs17566 LS-SNP   dbSNP   A 153 S - > I Turn 68% (Exposed) 7 81386529
    rs73381183 LS-SNP   dbSNP   A 175 N - > S Turn 14% (Intermediate) 7 81381537
    rs148615168 LS-SNP   dbSNP   A 193 N - > S Bend 34% (Intermediate) 7 81381483