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HIV-1 gp120 Envelope Glycoprotein Complexed with the Broadly Neutralizing CD4-Binding-Site Antibody b12
Biology and Chemistry Report
2NY7
  •   Structure Details   Hide

    Structure Keywords

    Keywords VIRAL PROTEIN/IMMUNE SYSTEM
    Text HIV, gp120, broadly neutralizing antibody, b12, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX

    Polymeric Molecules

    Chain G
    Description ENVELOPE GLYCOPROTEIN GP120 
    Fragment CORE 
    Mutation M95W, W96C, I109C, T257S, V275C, S334A, S375W, Q428C, A433M 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 35127.1 
    Source Method genetically manipulated  
    Chain H
    Description ANTIBODY b12, HEAVY CHAIN 
    Fragment ANTIGEN-BINDING FRAGMENT, FAB 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 24911.0 
    Source Method genetically manipulated  
    Chain L
    Description ANTIBODY b12, LIGHT CHAIN 
    Fragment ANTIGEN-BINDING FRAGMENT, FAB 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 23707.5 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    NAG  N-ACETYL-D-GLUCOSAMINE  C8 H15 N O6   221.21  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    G ENV_HV1H2 P04578     
    L IGKC_HUMAN P01834     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    Immune Epitopes (B-cell and T-Cell)

    Immune Epitope Database (IEDB)
    Epitope ID 174343    
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain L
    GO ID   Ontology GO Term Definition
    3823   Antigen Binding  Interacting Selectively and Non Covalently with an Antigen Any Substance Which Is Capable of Inducing a Specific Immune Response and of Reacting with the Products of That Response the Specific Antibody or Specifically Sensitized T Lymphocytes or Both. Binding May Counteract the Biological Activity of the Antigen. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain L
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Host Common Name Chinese Hamster
    Host Scientific Name Cricetulus griseus  
    Host Genus Cricetulus
    Host Strain Cho K1
    Host Vector Type Plasmid
    Host Plasmid Name pDR12


    Chain H
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Host Common Name Chinese Hamster
    Host Scientific Name Cricetulus griseus  
    Host Genus Cricetulus
    Host Strain Cho K1
    Host Vector Type Plasmid
    Host Plasmid Name pDR12


    Chain G
    Scientific Name Human immunodeficiency virus 1  
    Genus Lentivirus
    Strain HXBC2
    Host Common Name Human
    Host Scientific Name Homo sapiens  
    Host Genus Homo
    Host Cell Line Embryonic Cell Line 293
    Host Organ Kidney
    Host Vector Type Plasmid
    Host Plasmid Name CMVR