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Structure of SRSF1 RRM2 in complex with the RNA 5'-UGAAGGAC-3'
Biology and Chemistry Report
2M8D
  •   Structure Details   Hide

    Structure Keywords

    Keywords RNA BINDING PROTEIN/RNA
    Text SR protein, pseudo-RRM, RRM, RNA BINDING PROTEIN-RNA complex

    Polymeric Molecules

    Chain A
    Description RNA (5'-R(*UP*GP*AP*AP*GP*GP*AP*C)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polyribonucleotide 
    Formula Weight 2589.6 
    Source Method synthetic  
    Chain B
    Description Serine/arginine-rich splicing factor 1 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10338.7 
    Source Method genetically manipulated  
    Entity Name Alternative-splicing factor 1, ASF-1, Splicing factor, arginine/serine-rich 1, pre-mRNA-splicing factor SF2, P33 subunit 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    B SRSF1_HUMAN B2R6Z7     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain B
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    6417   Regulation of Translation  Any Process That Modulates the Frequency Rate or Extent of the Chemical Reactions and Pathways Resulting in the Formation of Proteins by the Translation of Mrna. 
    43488   Regulation of MRNA Stability  Any Process That Modulates the Propensity of MRNA Molecules to Degradation. Includes Processes That Both Stabilize and Destabilize Mrnas. 
    48024   Regulation of MRNA Splicing Via Spliceosome  Any Process That Modulates the Frequency Rate or Extent of MRNA Splicing Via a Spliceosomal Mechanism. 
    166   Nucleotide Binding  Interacting Selectively and Non Covalently with a Nucleotide Any Compound Consisting of a Nucleoside That Is Esterified with (ortho)phosphate or an Oligophosphate At Any Hydroxyl Group On the Ribose or Deoxyribose. 
    3676   Nucleic Acid Binding  Interacting Selectively and Non Covalently with Any Nucleic Acid. 
    3729   MRNA Binding  Interacting Selectively and Non Covalently with Messenger RNA (mrna) an Intermediate Molecule Between DNA and Protein. MRNA Includes Utr and Coding Sequences But Does Not Contain Introns. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain B
    Common Name Human
    Scientific Name Homo sapiens  
    Gene srsf1, asf, sf2, sf2p33, sfrs1, ok/sw-cl.3
    Host Scientific Name Escherichia coli  


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    17 17q22 6426     serine/arginine-rich splicing factor 1 SRSF1