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Structure of HIV-1 myr(-) matrix protein in complex with 1,2-dioctanoyl-sn-phosphatidyl-L-serine
Biology and Chemistry Report
2LYB
  •   Structure Details   Hide

    Structure Keywords

    Keywords VIRAL PROTEIN
    Text Gag, matrix, plasma membrane, lipid, VIRAL PROTEIN

    Polymeric Molecules

    Chain A
    Description Matrix protein p17 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 15563.6 
    Source Method genetically manipulated  
    Entity Name MA, Gag-Pol polyprotein 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    8SP  O-[(R)-{[(2R)-2,3-bis(octanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine  C22 H42 N O10 P   511.54  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A POL_HV1N5 P12497     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    19028   Viral Capsid  The Protein Coat That Surrounds the Infective Nucleic Acid in Some Virus Particles. It Comprises Numerous Regularly Arranged Subunits or Capsomeres. 
    5198   Structural Molecule Activity  The Action of a Molecule That Contributes to the Structural Integrity of a Complex or Assembly Within or Outside a Cell. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Scientific Name Human immunodeficiency virus type 1  
    Strain NEW YORK-5 ISOLATE
    Gene gag-pol
    Host Scientific Name Escherichia coli  
    Host Vector Pet21