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Solution structure of Oxidised ERp18
Biology and Chemistry Report
2K8V
  •   Structure Details   Hide

    Structure Keywords

    Keywords OXIDOREDUCTASE
    Text endoplasmic reticulum, thioredoxin fold, oxidase, Oxidoreductase, Redox-active center

    Polymeric Molecules

    Chain A
    Description Thioredoxin domain-containing protein 12 
    Fragment UNP residues 24-172 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 17801.1 
    Source Method genetically manipulated  
    Entity Name Thioredoxin-like protein p19, Endoplasmic reticulum protein ERp19, ERp18, hTLP19 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A TXD12_HUMAN B3KQS0     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    1.8.4.2      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    45454   Cell Redox Homeostasis  Any Process That Maintains the Redox Environment of a Cell or Compartment Within a Cell. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Gene txndc12, tlp19, unq713/pro1376
    Host Scientific Name Escherichia coli  
    Host Strain Bl21 (de3)
    Host Vector Type Plasmid
    Host Plasmid Name pLysS


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1p32.3 51060     thioredoxin domain containing 12 (endoplasmic reticulum) TXNDC12    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs202002637 LS-SNP   dbSNP   A 1 S - > T Coil 91% (Exposed) 1 52520722
    rs141609799 LS-SNP   dbSNP   A 7 I - > T Coil 98% (Exposed) 1 52520704
    rs201120216 LS-SNP   dbSNP   A 37 A - > S Helix 87% (Exposed) 1 52507213
    rs146106775 LS-SNP   dbSNP   A 65 T - > S 3/10 Helix 82% (Exposed) 1 52492994
    rs75251405 LS-SNP   dbSNP   A 65 T - > M 3/10 Helix 82% (Exposed) 1 52492993
    rs117580366 LS-SNP   dbSNP   A 67 I - > M Helix 5% (Buried) 1 52492986
    rs200853285 LS-SNP   dbSNP   A 72 H - > P 3/10 Helix 73% (Exposed) 1 52492972
    rs17850421 LS-SNP   dbSNP   A 87 D - > H Bend 64% (Exposed) 1 52490233
    rs138944221 LS-SNP   dbSNP   A 99 R - > Q Coil 13% (Intermediate) 1 52490196
    rs199849902 LS-SNP   dbSNP   A 101 L - > V Beta Ladder 0% (Buried) 1 52490191
    rs200809621 LS-SNP   dbSNP   A 139 A - > V Helix 3% (Buried) 1 52486663