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An Information Portal to 105097 Biological Macromolecular Structures

Polymerase Lambda BRCT domain
Biology and Chemistry Report
2JW5
  •   Structure Details   Hide

    Structure Keywords

    Keywords PROTEIN BINDING
    Text BRCT domain, Family X Polymerase, nonhomologous end joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Lyase, Manganese, Metal-binding, Nucleotidyltransferase, Nucleus, Phosphorylation, Transferase, PROTEIN BINDING

    Polymeric Molecules

    Chain A
    Description DNA polymerase lambda 
    Fragment BRCT domain (residues 34-135) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 11642.4 
    Source Method genetically manipulated  
    Entity Name Pol Lambda, DNA polymerase kappa, DNA polymerase beta-2, Pol beta2 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A DPOLL_HUMAN D3DR76     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    2.7.7.7      
    4.2.99      
     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Gene poll
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Vector Pet


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    10 10q23 27343     polymerase (DNA directed), lambda POLL    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs201211517 LS-SNP   dbSNP   A 42 S - > N 3/10 Helix 42% (Exposed) 10 103345904
    rs141683033 LS-SNP   dbSNP   A 45 R - > Q Coil 17% (Intermediate) 10 103345895
    rs201767388 LS-SNP   dbSNP   A 45 R - > W Coil 17% (Intermediate) 10 103345896
    rs61757734 LS-SNP   dbSNP   A 57 R - > W Bend 85% (Exposed) 10 103345860
    rs143021263 LS-SNP   dbSNP   A 70 G - > S Coil 0% (Buried) 10 103345821
    rs201624181 LS-SNP   dbSNP   A 128 A - > T 3/10 Helix 66% (Exposed) 10 103345647