An Information Portal to 108957 Biological Macromolecular Structures

Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Keywords RECEPTOR

    Polymeric Molecules

    Chain A,B
    Description TOLL LIKE RECEPTOR 10 
    Fragment TIR DOMAIN, RESIDUES 622-776 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 21289.5 
    Source Method genetically manipulated  

  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B TLR10_HUMAN Q9BXR5     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    2755   Myd88 Dependent Toll Like Receptor Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to a Toll Like Receptor Where the Myd88 Adaptor Molecule Mediates Transduction of the Signal. Toll Like Receptors Directly Bind Pattern Motifs From a Variety of Microbial Sources to Initiate Innate Immune Response. 
    7165   Signal Transduction  The Cellular Process in Which a Signal Is Conveyed to Trigger a Change in the Activity or State of a Cell. Signal Transduction Begins with Reception of a Signal (e.g. a Ligand Binding to a Receptor or Receptor Activation by a Stimulus Such As Light) or For Signal Transduction in the Absence of Ligand Signal Withdrawal or the Activity of a Constitutively Active Receptor. Signal Transduction Ends with Regulation of a Downstream Cellular Process E.g. Regulation of Transcription or Regulation of a Metabolic Process. Signal Transduction Covers Signaling From Receptors Located On the Surface of the Cell and Signaling Via Molecules Located Within the Cell. For Signaling Between Cells Signal Transduction Is Restricted to Events At and Within the Receiving Cell. 
    34166   Toll Like Receptor 10 Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to Toll Like Receptor 10. 
    45087   Innate Immune Response  Innate Immune Responses Are Defense Responses Mediated by Germline Encoded Components That Directly Recognize Components of Potential Pathogens. 
    50707   Regulation of Cytokine Secretion  Any Process That Modulates the Frequency Rate or Extent of the Regulated Release of Cytokines From a Cell. 
    50729   Positive Regulation of Inflammatory Response  Any Process That Activates or Increases the Frequency Rate or Extent of the Inflammatory Response. 
    16021   Integral Component of Membrane  The Component of a Membrane Consisting of Gene Products and Protein Complexes That Have Some Part That Penetrates At Least One Leaflet of the Membrane Bilayer. This Component Includes Gene Products That Are Buried in the Bilayer with No Exposure Outside the Bilayer. 
    4888   Transmembrane Signaling Receptor Activity  Combining with an Extracellular or Intracellular Signal and Transmitting the Signal From One Side of the Membrane to the Other to Initiate a Change in Cell Activity. 

  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Pnic Bsa4
    Host Plasmid Name PNIC-BSA4

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    4 4p14 81793     toll-like receptor 10 TLR10    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs143358634 LS-SNP   dbSNP   A 686 I - > T Helix 4% (Buried) 4 38775155
    rs149212123 LS-SNP   dbSNP   A 696 L - > F Beta Ladder 1% (Buried) 4 38775124
    rs202015443 LS-SNP   dbSNP   A 707 H - > R 3/10 Helix 0% (Buried) 4 38775092
    rs144520113 LS-SNP   dbSNP   A 728 I - > T Beta Ladder 0% (Buried) 4 38775029
    rs11466660 LS-SNP   dbSNP   A 736 Y - > C 3/10 Helix 91% (Exposed) 4 38775005
    rs149895872 LS-SNP   dbSNP   A 752 K - > R Turn 72% (Exposed) 4 38774957
    rs139111585 LS-SNP   dbSNP   A 761 R - > K 3/10 Helix 88% (Exposed) 4 38774930
    rs144922246 LS-SNP   dbSNP   A 762 R - > C 3/10 Helix 84% (Exposed) 4 38774928
    rs4129009 LS-SNP   dbSNP   A 775 I - > FLV Helix 18% (Intermediate) 4 38774889