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HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEX
Biology and Chemistry Report
2HMI
  •   Structure Details   Hide

    Structure Keywords

    Keywords IMMUNE SYSTEM/DNA
    Text AIDS, HIV-1, RT, POLYMERASE, IMMUNE SYSTEM-DNA COMPLEX

    Polymeric Molecules

    Chain E
    Description DNA (5'-D(*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*C)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 5864.9 
    Source Method synthetic  
    Chain F
    Description DNA (5'-D(*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*A)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 5484.6 
    Source Method synthetic  
    Chain A
    Description SUBUNIT OF V-1 REVERSE TRANSCRIPTASE 
    Mutation C280S 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 64275.4 
    Source Method genetically manipulated  
    Entity Name HIV-1 RT 
    Entity Name Sys E.C.2.7.7.49 
    Chain B
    Description HISUBUNIT OF V-1 REVERSE TRANSCRIPTASE 
    Mutation C280S 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 50282.3 
    Source Method genetically manipulated  
    Entity Name HIV-1 RT 
    Entity Name Sys E.C.2.7.7.49 
    Chain C
    Description FAB FRAGMENT OF MONOCLONAL ANTIBODY 28 
    Fragment FAB FRAGMENT 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 22984.2 
    Source Method natural source  
    Entity Name FAB 28 
    Chain D
    Description FAB FRAGMENT OF MONOCLONAL ANTIBODY 28 
    Fragment FAB FRAGMENT 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 23457.3 
    Source Method natural source  
    Entity Name FAB 28 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A POL_HV1B1 P03366     
    B POL_HV1B1 P03366     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc Catalytic Site(s)
    2.7.7.49        
    2.7.7.7        
    3.1.26.13        
    2.7.7.49        
    2.7.7.7        
    3.1.26.13        

    Immune Epitopes (B-cell and T-Cell)

    Immune Epitope Database (IEDB)
    Epitope ID 150793    
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    6278   RNA Dependent DNA Replication  A DNA Replication Process That Uses RNA As a Template For RNA Dependent DNA Polymerases (e.g. Reverse Transcriptase) That Synthesize the New Strands. 
    3676   Nucleic Acid Binding  Interacting Selectively and Non Covalently with Any Nucleic Acid. 
    3964   RNA Directed DNA Polymerase Activity  Catalysis of the Reaction: Deoxynucleoside Triphosphate + Dna(n) = Diphosphate + Dna(n+1). Catalyzes RNA Template Directed Extension of the 3' End of a DNA Strand by One Deoxynucleotide At a Time. 
    4523   RNA DNA Hybrid Ribonuclease Activity  Catalysis of the Endonucleolytic Cleavage of RNA in RNA DNA Hybrids to 5' Phosphomonoesters. 
    Chain B
    GO ID   Ontology GO Term Definition
    6278   RNA Dependent DNA Replication  A DNA Replication Process That Uses RNA As a Template For RNA Dependent DNA Polymerases (e.g. Reverse Transcriptase) That Synthesize the New Strands. 
    3964   RNA Directed DNA Polymerase Activity  Catalysis of the Reaction: Deoxynucleoside Triphosphate + Dna(n) = Diphosphate + Dna(n+1). Catalyzes RNA Template Directed Extension of the 3' End of a DNA Strand by One Deoxynucleotide At a Time. 


     
  •   Gene Details   Hide

    Natural Source

    Chain D
    Common Name House Mouse
    Scientific Name Mus musculus  
    Genus Mus
    Strain BALB/C
    Chain C
    Common Name House Mouse
    Scientific Name Mus musculus  
    Genus Mus
    Strain BALB-C

    Genetic Source

    Chain B
    Scientific Name Human immunodeficiency virus 1  
    Genus Lentivirus
    Strain BH10 ISOLATE
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia


    Chain A
    Scientific Name Human immunodeficiency virus 1  
    Genus Lentivirus
    Strain BH10 ISOLATE
    ATCC Source Atcc 1065288
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia