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THE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR AT 1.7 ANGSTROMS RESOLUTION
Biology and Chemistry Report
2HFT
  •   Structure Details   Hide

    Structure Keywords

    Keywords COAGULATION FACTOR
    Text COAGULATION FACTOR

    Polymeric Molecules

    Chain A
    Description HUMAN TISSUE FACTOR 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 24697.6 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    SO4  SULFATE ION  O4 S   96.06  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A TF_HUMAN D3DT47     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    7596   Blood Coagulation  The Sequential Process in Which the Multiple Coagulation Factors of the Blood Interact Ultimately Resulting in the Formation of an Insoluble Fibrin Clot; It May Be Divided Into Three Stages: Stage 1 the Formation of Intrinsic and Extrinsic Prothrombin Converting Principle; Stage 2 the Formation of Thrombin; Stage 3 the Formation of Stable Fibrin Polymers. 
    16021   Integral Component of Membrane  The Component of a Membrane Consisting of Gene Products and Protein Complexes That Have Some Part That Penetrates At Least One Leaflet of the Membrane Bilayer. This Component Includes Gene Products That Are Buried in the Bilayer with No Exposure Outside the Bilayer. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1p22-p21 2152     coagulation factor III (thromboplastin, tissue factor) F3    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs3917604 LS-SNP   dbSNP   A 4 T - > A Bend 75% (Exposed) 1 95005919
    rs148395733 LS-SNP   dbSNP   A 8 A - > T Coil 36% (Intermediate) 1 95005907
    rs180965157 LS-SNP   dbSNP   A 17 T - > A Beta Ladder 47% (Exposed) 1 95005880
    rs188147457 LS-SNP   dbSNP   A 18 N - > S Turn 15% (Intermediate) 1 95005876
    rs114064069 LS-SNP   dbSNP   A 22 I - > V Beta Ladder 21% (Intermediate) 1 95005865
    rs28672143 LS-SNP   dbSNP   A 25 W - > G Beta Ladder 4% (Buried) 1 95005856
    rs77418724 LS-SNP   dbSNP   A 52 T - > K Beta Ladder 20% (Intermediate) 1 95001682
    rs143237190 LS-SNP   dbSNP   A 61 D - > G Helix 67% (Exposed) 1 95001655
    rs199905967 LS-SNP   dbSNP   A 62 E - > K Helix 13% (Intermediate) 1 95001653
    rs142432480 LS-SNP   dbSNP   A 93 L - > Q Coil 25% (Intermediate) 1 95001559
    rs3917627 LS-SNP   dbSNP   A 113 I - > V Beta Ladder 11% (Intermediate) 1 94998804
    rs187119941 LS-SNP   dbSNP   A 127 V - > I Beta Ladder 1% (Buried) 1 94998762
    rs5901 LS-SNP   dbSNP   A 131 R - > W Beta Ladder 77% (Exposed) 1 94998750
    rs200192517 LS-SNP   dbSNP   A 142 S - > R Beta Ladder 11% (Intermediate) 1 94998715
    rs199637318 LS-SNP   dbSNP   A 152 I - > V Beta Ladder 21% (Intermediate) 1 94998687
    rs145825168 LS-SNP   dbSNP   A 164 G - > R Coil 70% (Exposed) 1 94998651
    rs185892338 LS-SNP   dbSNP   A 178 D - > G Beta Ladder 61% (Exposed) 1 94997999
    rs143207556 LS-SNP   dbSNP   A 200 R - > W Coil 36% (Intermediate) 1 94997934
    rs200768220 LS-SNP   dbSNP   A 205 S - > G Coil 4% (Buried) 1 94997919