POP-OUT | CLOSE

An Information Portal to 108957 Biological Macromolecular Structures

Crystal structure of the bb' fragment of ERp57
Biology and Chemistry Report
2H8L
  •   Structure Details   Hide

    Structure Keywords

    Keywords ISOMERASE
    Text thioredoxin-like fold, ISOMERASE

    Polymeric Molecules

    Chain A,B,C
    Description Protein disulfide-isomerase A3 
    Fragment bb' fragment 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 28818.7 
    Source Method genetically manipulated  
    Entity Name Disulfide isomerase ER-60, ERp60, 58 kDa microsomal protein, p58, ERp57, 58 kDa glucose-regulated protein 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C PDIA3_HUMAN P30101     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B C  5.3.4.1      
     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Gene pdia3, erp60, grp58
    Host Scientific Name Escherichia coli bl21  
    Host Genus Escherichia
    Host Species Escherichia Coli
    Host Strain Bl21
    Host Vector Type Plasmid
    Host Plasmid Name pGEX-6P-1


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    15 15q15 2923     protein disulfide isomerase family A, member 3 PDIA3    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs55968494 LS-SNP   dbSNP   A 149 I - > V Helix 9% (Intermediate) 15 44053702
    rs199676605 LS-SNP   dbSNP   A 165 S - > N Bend 12% (Intermediate) 15 44055296
    rs139812953 LS-SNP   dbSNP   A 181 N - > S Turn 18% (Intermediate) 15 44055344
    rs202041084 LS-SNP   dbSNP   A 181 N - > D Turn 18% (Intermediate) 15 44055343
    rs192183348 LS-SNP   dbSNP   A 193 V - > M Helix 0% (Buried) 15 44055379
    rs200051575 LS-SNP   dbSNP   A 195 E - > Q Helix 62% (Exposed) 15 44055385
    rs201790285 LS-SNP   dbSNP   A 197 D - > G Coil 16% (Intermediate) 15 44055392
    rs147623347 LS-SNP   dbSNP   A 199 N - > Y Bend 87% (Exposed) 15 44055397
    rs113762568 LS-SNP   dbSNP   A 207 R - > H Coil 10% (Intermediate) 15 44057665
    rs139512846 LS-SNP   dbSNP   A 210 H - > Q 3/10 Helix 32% (Intermediate) 15 44057675
    rs1053428 LS-SNP   dbSNP   A 215 F - > L Turn 21% (Intermediate) 15 44057690
    rs1053429 LS-SNP   dbSNP   A 224 E - > V Coil 51% (Exposed) 15 44057716
    rs149089784 LS-SNP   dbSNP   A 240 I - > V Bend 3% (Buried) 15 44057763
    rs142151137 LS-SNP   dbSNP   A 255 I - > T Helix 5% (Buried) 15 44058129
    rs151274866 LS-SNP   dbSNP   A 261 L - > V Beta Ladder 0% (Buried) 15 44058146
    rs202177052 LS-SNP   dbSNP   A 284 M - > V Helix 0% (Buried) 15 44058930
    rs138119635 LS-SNP   dbSNP   A 304 R - > H Turn 7% (Buried) 15 44058991
    rs61742242 LS-SNP   dbSNP   A 344 R - > H Turn 13% (Intermediate) 15 44060689
    rs201439446 LS-SNP   dbSNP   A 360 N - > S Coil 62% (Exposed) 15 44060737