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Crystal Structure of the CSL-Notch-Mastermind ternary complex bound to DNA
Biology and Chemistry Report
2FO1
  •   Structure Details   Hide

    Structure Keywords

    Keywords GENE REGULATION/SIGNALLING PROTEIN/DNA
    Text beta-barrel, PROTEIN-DNA COMPLEX, DOUBLE HELIX, ankyrin repeat, GENE REGULATION-SIGNALLING PROTEIN-DNA COMPLEX

    Polymeric Molecules

    Chain B
    Description 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3' 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 4673.1 
    Source Method synthetic  
    Chain C
    Description 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3' 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 4504.0 
    Source Method synthetic  
    Chain A
    Description Lin-12 and glp-1 phenotype protein 1, isoform b 
    Fragment CORE (RESIDUES 192-663) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 53762.3 
    Source Method genetically manipulated  
    Entity Name LAG-1 
    Chain D
    Description Protein lag-3 
    Fragment CONSERVED N-TERMINUS (49-132) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 9755.7 
    Source Method genetically manipulated  
    Entity Name PROTEIN SEL-8, Abnormal germ line proliferation protein 3, Abnormal cell lineage protein 3 
    Chain E
    Description Lin-12 protein 
    Fragment RAM AND ANK REPEAT DOMAINS (931-1303) 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 42457.8 
    Source Method genetically manipulated  

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A Q8MXE7_CAEEL Q8MXE7     
    D LAG3_CAEEL Q09260     
    E LIN12_CAEEL P14585     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    978   RNA Polymerase Ii Core Promoter Proximal Region Sequence Specific DNA Binding  Interacting Selectively and Non Covalently with a Sequence of DNA That Is in Cis with and Relatively Close to a Core Promoter For RNA Polymerase Ii. 
    982   Transcription Factor Activity RNA Polymerase Ii Core Promoter Proximal Region Sequence Specific Binding  Interacting Selectively and Non Covalently with a Sequence of DNA That Is in Cis with and Relatively Close to a Core Promoter For RNA Polymerase Ii (rnap Ii) in Order to Modulate Transcription by Rnap Ii. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    3700   Transcription Factor Activity Sequence Specific DNA Binding  Interacting Selectively and Non Covalently with a Specific DNA Sequence in Order to Modulate Transcription. the Transcription Factor May or May Not Also Interact Selectively with a Protein or Macromolecular Complex. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain E
    Scientific Name Caenorhabditis elegans  
    Genus Caenorhabditis
    Gene lin-12
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Rosetta2(de3)plyss
    Host Vector Type Plasmid
    Host Plasmid Name pGEX4T-2


    Chain D
    Scientific Name Caenorhabditis elegans  
    Genus Caenorhabditis
    Gene sel-8, lag-3
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Rosetta2(de3)plyss
    Host Vector Type Plasmid
    Host Plasmid Name pET28A pSMT variant


    Chain A
    Scientific Name Caenorhabditis elegans  
    Genus Caenorhabditis
    Gene lag-1
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Rosetta2(de3)plyss
    Host Vector Type Plasmid
    Host Plasmid Name PGEX6P-1


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    III - 175464     SEL-8 SEL-8    
    III - 176282     LIN-12 LIN-12