An Information Portal to 110790 Biological Macromolecular Structures

Solution structure of the RRM_1 domain of NCL protein
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Text structure genomics, RRM_1 domain, NCL protein, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN

    Polymeric Molecules

    Chain A
    Description NCL protein 
    Fragment RRM_1 domain, residues 8-96 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10604.4 
    Source Method genetically manipulated  

  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A NUCL_HUMAN P19338     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    166   Nucleotide Binding  Interacting Selectively and Non Covalently with a Nucleotide Any Compound Consisting of a Nucleoside That Is Esterified with (ortho)phosphate or an Oligophosphate At Any Hydroxyl Group On the Ribose or Deoxyribose. 
    3676   Nucleic Acid Binding  Interacting Selectively and Non Covalently with Any Nucleic Acid. 

  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Host Scientific Name Cell-free synthesis  
    Host Vector Type Plasmid
    Host Plasmid Name P050516-05

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs184670810 LS-SNP   dbSNP   A 4 P - > R Coil 96% (Exposed) 2 232321368
    rs201202820 LS-SNP   dbSNP   A 6 G - > V Coil 78% (Exposed) 2 232321362
    rs113883398 LS-SNP   dbSNP   A 31 T - > A Helix 31% (Intermediate) 2 232320794
    rs201353243 LS-SNP   dbSNP   A 95 G - > C Bend 67% (Exposed) 2 232320217