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RNA-dependent RNA polymerase of foot-and-mouth disease virus in complex with a template-primer RNA and ATP
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Text RNA-dependent RNA polymerase, 3D polymerase, polymerase, foot-and- mouth disease virus, TRANSFERASE-RNA COMPLEX

    Polymeric Molecules

    Chain B,E
    Description 5'-R(P*AP*UP*GP*GP*GP*CP*CP*C)-3' 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polyribonucleotide 
    Formula Weight 2541.6 
    Source Method synthetic  
    Chain C,F
    Description 5'-R(*GP*GP*GP*CP*CP*CP*A)-3' 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polyribonucleotide 
    Formula Weight 2235.4 
    Source Method synthetic  
    Chain A,D
    Description RNA-dependent RNA polymerase 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 53487.3 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    MG  MAGNESIUM ION  Mg   24.31  View 
    PPV  PYROPHOSPHATE  H4 O7 P2   177.98  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,D Q9QCE4_9PICO Q9QCE4     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A D      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,D
    GO ID   Ontology GO Term Definition
    6351   Transcription DNA Templated  The Cellular Synthesis of RNA On a Template of Dna. 
    39694   Viral RNA Genome Replication  The Replication of a Viral RNA Genome. 
    3723   RNA Binding  Interacting Selectively and Non Covalently with an RNA Molecule or a Portion Thereof. 
    3968   RNA Directed RNA Polymerase Activity  Catalysis of the Reaction: Nucleoside Triphosphate + Rna(n) = Diphosphate + Rna(n+1); Uses an RNA Template. 

  •   Gene Details   Hide

    Genetic Source

    Chain A,D
    Scientific Name Foot-and-mouth disease virus c-s8c1  
    Genus Aphthovirus
    Species Foot and Mouth Disease Virus
    Strain C-S8C1
    Gene 3d
    Host Scientific Name Escherichia coli bl21  
    Host Genus Escherichia
    Host Species Escherichia Coli
    Host Strain Bl21
    Host Vector Type Plasmid
    Host Plasmid Name pET-28a