POP-OUT | CLOSE

An Information Portal to 111749 Biological Macromolecular Structures

Solution structure of the 12th filamin domain from human Filamin-B
Biology and Chemistry Report
2DIC
  •   Structure Details   Hide

    Structure Keywords

    Keywords Structural protein
    Text beta-sandwich, immunoglobulin-like fold, filamin domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural protein

    Polymeric Molecules

    Chain A
    Description Filamin-B 
    Fragment Filamin domain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10707.9 
    Source Method genetically manipulated  
    Entity Name FLN-B, Beta-filamin, Actin-binding-like protein, Thyroid autoantigen, Truncated actin-binding protein, Truncated ABP, ABP-280 homolog, ABP-278, Filamin 3, Filamin homolog 1, Fh1 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A FLNB_HUMAN O75369     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    1.14.13.80      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    30036   Actin Cytoskeleton Organization  A Process That Is Carried Out At the Cellular Level Which Results in the Assembly Arrangement of Constituent Parts or Disassembly of Cytoskeletal Structures Comprising Actin Filaments and Their Associated Proteins. 
    30154   Cell Differentiation  The Process in Which Relatively Unspecialized Cells E.g. Embryonic or Regenerative Cells Acquire Specialized Structural And/or Functional Features That Characterize the Cells Tissues or Organs of the Mature Organism or Some Other Relatively Stable Phase of the Organism's Life History. Differentiation Includes the Processes Involved in Commitment of a Cell to a Specific Fate and Its Subsequent Development to the Mature State. 
    3779   Actin Binding  Interacting Selectively and Non Covalently with Monomeric or Multimeric Forms of Actin Including Actin Filaments. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Gene flnb
    Host Scientific Name Cell free synthesis  
    Host Vector Type Plasmid
    Host Plasmid Name P060123-12
    Description Cell Free Protein Synthesis


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    3 3p14.3 2317     filamin B, beta FLNB    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs202156074 LS-SNP   dbSNP   A 6 T - > S Coil 34% (Intermediate) 3 58111376
    rs139269734 LS-SNP   dbSNP   A 24 A - > G Beta Ladder 2% (Buried) 3 58111431
    rs146093652 LS-SNP   dbSNP   A 30 N - > S Beta Ladder 8% (Buried) 3 58111449
    rs142718547 LS-SNP   dbSNP   A 36 T - > S Coil 11% (Intermediate) 3 58111467
    rs151002497 LS-SNP   dbSNP   A 74 A - > V Bend 26% (Intermediate) 3 58112439
    rs182296960 LS-SNP   dbSNP   A 75 P - > L Coil 40% (Exposed) 3 58112442
    rs186956439 LS-SNP   dbSNP   A 91 G - > S Turn 48% (Exposed) 3 58112489
    rs143831841 LS-SNP   dbSNP   A 94 F - > L Beta Ladder 19% (Intermediate) 3 58116478