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Solution structure of the 9th filamin domain from human Filamin-B
Biology and Chemistry Report
2DI9
  •   Structure Details   Hide

    Structure Keywords

    Keywords STRUCTURAL PROTEIN
    Text beta-sandwich, immunoglobulin-like fold, filamin domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN

    Polymeric Molecules

    Chain A
    Description Filamin-B 
    Fragment Filamin domain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 13206.6 
    Source Method genetically manipulated  
    Entity Name FLN-B, Beta-filamin, Actin-binding-like protein, Thyroid autoantigen, Truncated actin-binding protein, Truncated ABP, ABP-280 homolog, ABP-278, Filamin 3, Filamin homolog 1, Fh1 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A FLNB_HUMAN O75369     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    1.14.13.80      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    30036   Actin Cytoskeleton Organization  A Process That Is Carried Out At the Cellular Level Which Results in the Assembly Arrangement of Constituent Parts or Disassembly of Cytoskeletal Structures Comprising Actin Filaments and Their Associated Proteins. 
    30154   Cell Differentiation  The Process in Which Relatively Unspecialized Cells E.g. Embryonic or Regenerative Cells Acquire Specialized Structural And/or Functional Features That Characterize the Cells Tissues or Organs of the Mature Organism or Some Other Relatively Stable Phase of the Organism's Life History. Differentiation Includes the Processes Involved in Commitment of a Cell to a Specific Fate and Its Subsequent Development to the Mature State. 
    3779   Actin Binding  Interacting Selectively and Non Covalently with Monomeric or Multimeric Forms of Actin Including Actin Filaments. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Gene flnb
    Host Scientific Name Cell free synthesis  
    Host Vector Type Plasmid
    Host Plasmid Name P051205-13
    Description Cell Free Protein Synthesis


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    3 3p14.3 2317     filamin B, beta FLNB    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs2276742 LS-SNP   dbSNP   A 9 V - > M Coil 130% (Exposed) 3 58107156
    rs199930817 LS-SNP   dbSNP   A 24 E - > A Bend 57% (Exposed) 3 58107202
    rs9813235 LS-SNP   dbSNP   A 46 V - > M Turn 30% (Intermediate) 3 58108856
    rs13321615 LS-SNP   dbSNP   A 48 K - > Q Bend 44% (Exposed) 3 58108862
    rs199513147 LS-SNP   dbSNP   A 53 T - > I Beta Ladder 44% (Exposed) 3 58108878
    rs201533113 LS-SNP   dbSNP   A 61 T - > I Bend 68% (Exposed) 3 58108902
    rs9832850 LS-SNP   dbSNP   A 64 L - > R Beta Ladder 30% (Intermediate) 3 58108911
    rs144874876 LS-SNP   dbSNP   A 88 V - > I Beta Ladder 2% (Buried) 3 58108982
    rs141140461 LS-SNP   dbSNP   A 94 K - > N Bend 66% (Exposed) 3 58109002
    rs200947960 LS-SNP   dbSNP   A 100 V - > I Beta Ladder 0% (Buried) 3 58109018
    rs187686169 LS-SNP   dbSNP   A 111 G - > E Turn 51% (Exposed) 3 58109052
    rs147522079 LS-SNP   dbSNP   A 116 A - > V Beta Ladder 0% (Buried) 3 58109067
    rs150475174 LS-SNP   dbSNP   A 128 V - > M Bend 99% (Exposed) 3 58109102
    rs200677231 LS-SNP   dbSNP   A 130 S - > L Coil 104% (Exposed) 3 58109109