2CNM

RimI - Ribosomal S18 N-alpha-protein acetyltransferase in complex with a bisubstrate inhibitor (Cterm-Arg-Arg-Phe-Tyr-Arg-Ala-N-alpha- acetyl-S-CoA).


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 2CNM

Classification: TRANSFERASE

Total Structure Weight: 59971.07

Macromolecule Entities
Molecule Chains Length Organism Details
MODIFICATION OF 30S RIBOSOMAL SUBUNIT PROTEIN S18 A, B, C 160 Salmonella enterica EC#: 2.3.1.128 IUBMB
Gene Name(s): rimI STM4558
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
30S RIBOSOMAL PROTEIN S18 D, E, F 7 Salmonella enterica Gene Name(s): rpsR STM4393
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
COA
Query on COA

D, E, F COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
D, E, F NON-POLYMER C2 H4 O --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.193
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 133.13 α = 90.00
b = 133.13 β = 90.00
c = 190.99 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-05-22
  • Released Date: 2007-05-22
  • Deposition author(s): Vetting, M.W., Yu, M., Bareich, D.C., Blanchard, J.S.

Revision History

  • Version 1_0: 2007-05-22

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Refinement description, Version format compliance

  • Version 1_2: 2017-02-08

    Type: Database references, Source and taxonomy, Structure summary

  • Version 1_3: 2017-02-15

    Type: Derived calculations