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Crystal Structure of Yeast Protein Disulfide Isomerase
Biology and Chemistry Report
2B5E
  •   Structure Details   Hide

    Structure Keywords

    Keywords ISOMERASE
    Text Protein Disulfide Isomerase, ISOMERASE

    Polymeric Molecules

    Chain A
    Description Protein disulfide-isomerase 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 56422.3 
    Source Method genetically manipulated  
    Entity Name PDI, Thioredoxin-related glycoprotein 1 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    BA  BARIUM ION  Ba   137.33  View 
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A PDI_YEAST D6VQX3     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc Catalytic Site(s)
    5.3.4.1        
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    45454   Cell Redox Homeostasis  Any Process That Maintains the Redox Environment of a Cell or Compartment Within a Cell. 
    5783   Endoplasmic Reticulum  The Irregular Network of Unit Membranes Visible Only by Electron Microscopy That Occurs in the Cytoplasm of Many Eukaryotic Cells. the Membranes Form a Complex Meshwork of Tubular Channels Which Are Often Expanded Into Slitlike Cavities Called Cisternae. the Er Takes Two Forms Rough (or Granular) with Ribosomes Adhering to the Outer Surface and Smooth (with No Ribosomes Attached). 
    16853   Isomerase Activity  Catalysis of the Geometric or Structural Changes Within One Molecule. Isomerase Is the Systematic Name For Any Enzyme of EC Class 5. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Baker's Yeast
    Scientific Name Saccharomyces cerevisiae  
    Genus Saccharomyces
    Gene pdi1, mfp1, trg1
    Host Scientific Name Escherichia coli bl21  
    Host Genus Escherichia
    Host Species Escherichia Coli
    Host Strain Bl21
    Host Vector Type Plasmid
    Host Plasmid Name pTYB12


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    III - 850314     protein disulfide isomerase PDI1 PDI1