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A Structural Model for the Membrane-Bound Form of the Juxtamembrane Domain of the Epidermal Growth Factor Receptor
Biology and Chemistry Report
1Z9I
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSFERASE
    Text juxtamembrane structure EGFR micelle, TRANSFERASE

    Polymeric Molecules

    Chain A
    Description Epidermal growth factor receptor 
    Fragment sequence database residues 669-721 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 6246.5 
    Source Method genetically manipulated  
    Entity Name Receptor tyrosine-protein kinase ErbB-1 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A EGFR_HUMAN O00688     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    2.7.10.1      
     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Gene egfr, erbb1
    Host Scientific Name Escherichia coli bl21(de3)  
    Host Genus Escherichia
    Host Species Escherichia Coli
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pGEX-3X


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    7 7p12 1956     epidermal growth factor receptor EGFR    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs17337079 LS-SNP   dbSNP   A 6 V - > I Coil 85% (Exposed) 7 55240776
    rs150423237 LS-SNP   dbSNP   A 7 R - > Q Coil 35% (Intermediate) 7 55240780
    rs138193597 LS-SNP   dbSNP   A 10 T - > M Helix 21% (Intermediate) 7 55240789
    rs28929495 LS-SNP   dbSNP   A 51 G - > CS Turn 64% (Exposed) 7 55241707
    rs121913428 LS-SNP   dbSNP   A 51 G - > AD Turn 64% (Exposed) 7 55241708