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human ARNT C-terminal PAS domain
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Text PAS, mixed alpha-beta fold, hypoxia, aryl hydrocarbon receptor nuclear translocator, ARNT, TRANSCRIPTION

    Polymeric Molecules

    Chain A
    Description Aryl hydrocarbon receptor nuclear translocator 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 13956.8 
    Source Method natural source  
    Entity Name ARNT protein, Dioxin receptor, nuclear translocator, Hypoxia-inducible factor 1 beta, HIF-1 beta 

  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A ARNT_HUMAN P27540     

  •   Gene Details   Hide

    Natural Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1q21 405     aryl hydrocarbon receptor nuclear translocator ARNT    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs199767293 LS-SNP   dbSNP   A 3 M - > L Coil 63% (Exposed) 1 150801676
    rs17855056 LS-SNP   dbSNP   A 12 F - > L Beta Ladder 0% (Buried) 1 150801647
    rs114037732 LS-SNP   dbSNP   A 59 D - > V Helix 42% (Exposed) 1 150799032
    rs2229175 LS-SNP   dbSNP   A 79 R - > Q Beta Ladder 40% (Exposed) 1 150795775
    rs2229176 LS-SNP   dbSNP   A 84 E - > K Coil 6% (Buried) 1 150795761
    rs145545051 LS-SNP   dbSNP   A 111 T - > A Beta Ladder 30% (Intermediate) 1 150795680