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human ARNT C-terminal PAS domain
Biology and Chemistry Report
1X0O
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSCRIPTION
    Text PAS, mixed alpha-beta fold, hypoxia, aryl hydrocarbon receptor nuclear translocator, ARNT, TRANSCRIPTION

    Polymeric Molecules

    Chain A
    Description Aryl hydrocarbon receptor nuclear translocator 
    Fragment C-TERMINAL PAS DOMAIN 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 13956.8 
    Source Method natural source  
    Entity Name ARNT protein, Dioxin receptor, nuclear translocator, Hypoxia-inducible factor 1 beta, HIF-1 beta 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A ARNT_HUMAN C4AMA1     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Natural Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1q21 405     aryl hydrocarbon receptor nuclear translocator ARNT    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs199767293 LS-SNP   dbSNP   A 3 M - > L Coil 63% (Exposed) 1 150801676
    rs17855056 LS-SNP   dbSNP   A 12 F - > L Beta Ladder 0% (Buried) 1 150801647
    rs114037732 LS-SNP   dbSNP   A 59 D - > V Helix 42% (Exposed) 1 150799032
    rs2229175 LS-SNP   dbSNP   A 79 R - > Q Beta Ladder 40% (Exposed) 1 150795775
    rs2229176 LS-SNP   dbSNP   A 84 E - > K Coil 6% (Buried) 1 150795761
    rs145545051 LS-SNP   dbSNP   A 111 T - > A Beta Ladder 30% (Intermediate) 1 150795680