An Information Portal to 106082 Biological Macromolecular Structures

Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Keywords Virus
    Text VIRUS COAT PROTEIN, Icosahedral virus, Virus

    Polymeric Molecules

    Chain 1,2,3,4,5,6
    Description SIMIAN VIRUS 40 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 39819.3 
    Source Method natural source  

  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    1,2,3,4,5,6 VP1_SV40 P03087     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain 1,2,3,4,5,6
    GO ID   Ontology GO Term Definition
    16032   Viral Process  A Multi Organism Process in Which a Virus Is a Participant. the Other Participant Is the Host. Includes Infection of a Host Cell Replication of the Viral Genome and Assembly of Progeny Virus Particles. in Some Cases the Viral Genetic Material May Integrate Into the Host Genome and Only Subsequently Under Particular Circumstances 'complete' Its Life Cycle. 
    19062   Virion Attachment to Host Cell  The Process by Which a Virion Protein Binds to Molecules On the Host Cellular Surface or Host Cell Surface Projection. 
    46718   Viral Entry Into Host Cell  The Process That Occurs After Viral Attachment by Which a Virus or Viral Nucleic Acid Breaches the Plasma Membrane or Cell Envelope and Enters the Host Cell. the Process Ends When the Viral Nucleic Acid Is Released Into the Host Cell Cytoplasm. 
    75509   Endocytosis Involved in Viral Entry Into Host Cell  Any Endocytosis That Is Involved in the Uptake of a Virus Into a Host Cell. 
    75513   Caveolin Mediated Endocytosis of Virus by Host Cell  Any Caveolin Mediated Endocytosis That Is Involved in the Uptake of a Virus Into a Host Cell. Begins When Material Is Taken Up Into Plasma Membrane Caveolae Specialized Lipid Rafts That Form 50 70 Nm Flask Shaped Invaginations of the Plasma Membrane Which Then Pinch Off to Form Endocytic Caveolar Carriers Containing the Virus. 
    19012   Virion  The Complete Fully Infectious Extracellular Virus Particle. 
    19028   Viral Capsid  The Protein Coat That Surrounds the Infective Nucleic Acid in Some Virus Particles. It Comprises Numerous Regularly Arranged Subunits or Capsomeres. 
    39620   T=7 Icosahedral Viral Capsid  The Protein Coat That Surrounds the Infective Nucleic Acid in Some Virus Particles Where the Subunits (capsomeres) Are Arranged to Form an Icosahedron with T=7 Symmetry. the T=7 Capsid Is Composed of 12 Pentameric and 60 Hexameric Capsomeres. 
    42025   Host Cell Nucleus  A Membrane Bounded Organelle As It Is Found in the Host Cell in Which Chromosomes Are Housed and Replicated. the Host Is Defined As the Larger of the Organisms Involved in a Symbiotic Interaction. 
    44165   Host Cell Endoplasmic Reticulum  The Irregular Network of Unit Membranes Visible Only by Electron Microscopy That Occurs in the Host Cell Cytoplasm of Many Eukaryotic Cells. the Membranes Form a Complex Meshwork of Tubular Channels Which Are Often Expanded Into Slitlike Cavities Called Cisternae. the Host Er Takes Two Forms Rough (or Granular) with Ribosomes Adhering to the Outer Surface and Smooth (with No Ribosomes Attached). 
    5198   Structural Molecule Activity  The Action of a Molecule That Contributes to the Structural Integrity of a Complex or Assembly Within or Outside a Cell. 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 

  •   Gene Details   Hide

    Natural Source

    Chain 1,2,3,4,5,6
    Scientific Name Simian virus 40  
    Genus Polyomavirus