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An Information Portal to 110790 Biological Macromolecular Structures

Rad51 (RadA)
Biology and Chemistry Report
1PZN
  •   Structure Details   Hide

    Structure Keywords

    Keywords RECOMBINATION
    Text HEPTAMERIC RING; HEPTAMER; RING; OLIGOMER; RAD51 POLYMERIZATION MOTIF; HELIX-HAIRPIN-HELIX; DNA REPAIR; DNA RECOMBINATION; ATPASE; HOMOLOGOUS RECOMBINATION, RECOMBINATION

    Polymeric Molecules

    Chain A,B,C,D,E,F,G
    Description DNA repair and recombination protein rad51 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 38643.9 
    Source Method genetically manipulated  
    Entity Name Rad51; RadA; recombinase radA 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    IMD  IMIDAZOLE  C3 H5 N2   69.09  View 
    MPD  (4S)-2-METHYL-2,4-PENTANEDIOL  C6 H14 O2   118.17  View 
    SO4  SULFATE ION  O4 S   96.06  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D,E,F,G RADA_PYRFU O74036     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D,E,F,G
    GO ID   Ontology GO Term Definition
    6259   DNA Metabolic Process  Any Cellular Metabolic Process Involving Deoxyribonucleic Acid. This Is One of the Two Main Types of Nucleic Acid Consisting of a Long Unbranched Macromolecule Formed From One or More Commonly Two Strands of Linked Deoxyribonucleotides. 
    6281   DNA Repair  The Process of Restoring DNA After Damage. Genomes Are Subject to Damage by Chemical and Physical Agents in the Environment (e.g. Uv and Ionizing Radiations Chemical Mutagens Fungal and Bacterial Toxins Etc.) and by Free Radicals or Alkylating Agents Endogenously Generated in Metabolism. DNA Is Also Damaged Because of Errors During Its Replication. a Variety of Different DNA Repair Pathways Have Been Reported That Include Direct Reversal Base Excision Repair Nucleotide Excision Repair Photoreactivation Bypass Double Strand Break Repair Pathway and Mismatch Repair Pathway. 
    6310   DNA Recombination  Any Process in Which a New Genotype Is Formed by Reassortment of Genes Resulting in Gene Combinations Different From Those That Were Present in the Parents. in Eukaryotes Genetic Recombination Can Occur by Chromosome Assortment Intrachromosomal Recombination or Nonreciprocal Interchromosomal Recombination. Intrachromosomal Recombination Occurs by Crossing Over. in Bacteria It May Occur by Genetic Transformation Conjugation Transduction or F Duction. 
    6974   Cellular Response to DNA Damage Stimulus  Any Process That Results in a Change in State or Activity of a Cell (in Terms of Movement Secretion Enzyme Production Gene Expression Etc.) As a Result of a Stimulus Indicating Damage to Its DNA From Environmental Insults or Errors During Metabolism. 
    166   Nucleotide Binding  Interacting Selectively and Non Covalently with a Nucleotide Any Compound Consisting of a Nucleoside That Is Esterified with (ortho)phosphate or an Oligophosphate At Any Hydroxyl Group On the Ribose or Deoxyribose. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    3684   Damaged DNA Binding  Interacting Selectively and Non Covalently with Damaged Dna. 
    5524   ATP Binding  Interacting Selectively and Non Covalently with ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    8094   DNA Dependent Atpase Activity  Catalysis of the Reaction: ATP + H2o = Adp + Phosphate; This Reaction Requires the Presence of Single or Double Stranded DNA and It Drives Another Reaction. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D,E,F,G
    Scientific Name Pyrococcus furiosus  
    Genus Pyrococcus
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    - - 1469806     DNA repair and recombination protein RadA PF_RS09730