NDG
Query on NDG
|
B
|
2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
NAG
Query on NAG
|
A, B
|
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
GAL
Query on GAL
|
B
|
BETA-D-GALACTOSE
C6 H12 O6
WQZGKKKJIJFFOK-FPRJBGLDSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
FUL
Query on FUL
|
B
|
BETA-L-FUCOSE
6-DEOXY-BETA-L-GALACTOSE (Synonym)
C6 H12 O5
SHZGCJCMOBCMKK-KGJVWPDLSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
SO4
Query on SO4
|
A
|
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
GOL
Query on GOL
|
A, B
|
GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
CL
Query on CL
|
A
|
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|