1P75

Crystal structure of EHV4-TK complexed with TP5A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.02 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 1P75

Classification: TRANSFERASE

Total Structure Weight: 153155.63

Macromolecule Entities
Molecule Chains Length Organism Details
Thymidine kinase A, B, C, D 334 Equid alphaherpesvirus 4 EC#: 2.7.1.21 IUBMB
Gene Name(s): TK
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
T5A
Query on T5A

A, B, C, D P1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE
C20 H30 N7 O23 P5
JCFDSPQTEMXXLO-SLFMBYJQSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.02 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.202
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 106.87 α = 90.00
b = 117.23 β = 90.00
c = 125.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-04-30
  • Released Date: 2003-11-04
  • Deposition author(s): Gardberg, A., Shuvalova, L., Monnerjahn, C., Konrad, M., Lavie, A.

Revision History

  • 2008-04-29
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance