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Crystal Structure of Weissella viridescens FemX:UDP-MurNAc-pentapeptide complex
Biology and Chemistry Report
1P4N
  •   Structure Details   Hide

    Structure Keywords

    Keywords Transferase/Transferase Substrate
    Text FemX, Transferase-Transferase Substrate complex

    Polymeric Molecules

    Chain A
    Description FemX 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 38196.2 
    Source Method genetically manipulated  
    Chain B
    Description UDP-MurNAc-pentapeptide 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 1151.0 
    Source Method natural source  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    MG  MAGNESIUM ION  Mg   24.31  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A Q9EY50_WEIVI Q9EY50     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc Catalytic Site(s)
    2.3.2.10        
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    8360   Regulation of Cell Shape  Any Process That Modulates the Surface Configuration of a Cell. 
    9252   Peptidoglycan Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Peptidoglycans Any of a Class of Glycoconjugates Found in Bacterial Cell Walls. 
    71555   Cell Wall Organization  A Process That Results in the Assembly Arrangement of Constituent Parts or Disassembly of the Cell Wall the Rigid or Semi Rigid Envelope Lying Outside the Cell Membrane of Plant Fungal and Most Prokaryotic Cells Maintaining Their Shape and Protecting Them From Osmotic Lysis. 
    16740   Transferase Activity  Catalysis of the Transfer of a Group E.g. a Methyl Group Glycosyl Group Acyl Group Phosphorus Containing or Other Groups From One Compound (generally Regarded As the Donor) to Another Compound (generally Regarded As the Acceptor). Transferase Is the Systematic Name For Any Enzyme of EC Class 2. 
    16746   Transferase Activity Transferring Acyl Groups  Catalysis of the Transfer of an Acyl Group From One Compound (donor) to Another (acceptor). 
    16755   Transferase Activity Transferring Amino Acyl Groups  Catalysis of the Transfer of an Amino Acyl Group From One Compound (donor) to Another (acceptor). 
    47206   Udp N Acetylmuramoylpentapeptide Lysine N6 Alanyltransferase Activity  Catalysis of the Reaction: Udp N Acetylmuramoyl L Alanyl D Glutamyl L Lysyl D Alanyl D Alanine + L Alanyl TRNA = Udp N Acetylmuramoyl L Alanyl D Glutamyl N6 (l Alanyl) L Lysyl D Alanyl D Alanine + Trna. 


     
  •   Gene Details   Hide

    Natural Source

    Chain B
    Scientific Name Staphylococcus aureus  

    Genetic Source

    Chain A
    Scientific Name Weissella viridescens  
    Genus Weissella
    Gene femx
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Er2566
    Host Vector Type Plasmid
    Host Plasmid Name pTYB2