1OOP

The Crystal Structure of Swine Vesicular Disease Virus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Observed: 0.245

Literature

Macromolecules
Sequence Display for 1OOP

Classification: VIRUS

Total Structure Weight: 94260.38

Macromolecule Entities
Molecule Chains Length Organism Details
Coat protein VP1 A 283 Enterovirus b Mutation: K80E, I182V
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Coat protein VP2 B 261 Enterovirus b Gene Name(s):
Coat protein VP3 C 238 Enterovirus b Gene Name(s):
Coat protein VP4 D 69 Enterovirus b Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SPH
Query on SPH

A SPHINGOSINE
C18 H37 N O2
WWUZIQQURGPMPG-MSOLQXFVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MYR
Query on MYR

D MYRISTIC ACID
C14 H28 O2
TUNFSRHWOTWDNC-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Observed: 0.245
  • Space Group: P 2 21 21

Unit Cell:

Length (Å) Angle (°)
a = 354.10 α = 90.00
b = 371.70 β = 90.00
c = 318.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-03-04
  • Released Date: 2003-04-22
  • Deposition author(s): Fry, E.E., Knowles, N.J., Newman, J.W.I., Wilsden, G., Rao, Z., King, A.M.Q., Stuart, D.I.

Revision History

  • Version 1_0: 2003-04-22

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-11

    Type: Refinement description