1OLN

Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA

Experimental Data Snapshot

  • Method: SOLUTION NMR, THEORETICAL MODEL
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: Least Restraint Violation and Best Overall Docking Score

wwPDB Validation 3D Report Full Report


Literature

Macromolecules
Sequence Display for 1OLN

Classification: RIBOSOME / ANTIBIOTIC

Total Structure Weight: 35479.86


Macromolecule Entities
Molecule Chains Length Organism Details
50S RIBOSOMAL PROTEIN L11 A 140 Thermotoga maritima Gene Name(s): rplK TM_0454
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
THIOSTREPTON B 19 Streptomyces azureus Gene Name(s): tpdA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA C 58 Thermotoga maritima

Small Molecules
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000223
Query on PRD_000223 		B THIOSTREPTON Thiopeptide /
Antibiotic 		Ligand Explorer

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR, THEORETICAL MODEL
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: LEAST RESTRAINT VIOLATION AND BEST OVERALL DOCKING SCORE

Structure Validation

View Full Validation Report or Ramachandran Plots


View more in-depth experimental data

Entry History

Deposition Data

  • Deposited Date: 2003-08-08
  • Released Date: 2003-09-11
  • Deposition author(s): Lentzen, G., Klinck, R., Matassova, N., Aboul-Ela, F., Murchie, A.I.H.

Revision History

  • Version 1_0: 2003-09-11

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Atomic model, Database references, Derived calculations, Structure summary, Version format compliance

  • Version 1_2: 2012-11-30

    Type: Other

  • Version 1_3: 2017-11-15

    Type: Database references