1OFD

Glutamate Synthase from Synechocystis sp in complex with 2-Oxoglutarate at 2.0 Angstrom resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 1OFD

Classification: OXIDOREDUCTASE

Total Structure Weight: 333219.84

Macromolecule Entities
Molecule Chains Length Organism Details
FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2 A, B 1520 Synechocystis sp. pcc 6803 EC#: 1.4.7.1 IUBMB
Mutation: T578D, D581T, G1507N
Gene Name(s): gltS sll1499
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A, B FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
F3S
Query on F3S

A, B FE3-S4 CLUSTER
Fe3 S4
FCXHZBQOKRZXKS-MZMDZPPWAW
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
AKG
Query on AKG

A, B 2-OXOGLUTARIC ACID
C5 H6 O5
KPGXRSRHYNQIFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.192
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 125.02 α = 90.00
b = 149.66 β = 90.00
c = 195.93 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-04-14
  • Released Date: 2003-06-11
  • Deposition author(s): Van Den heuvel, R.H.H., Mattevi, A.

Revision History

  • Version 1_0: 2003-06-11

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Version format compliance