1O8S

Structure of CsCBM6-3 from Clostridium stercorarium in complex with cellobiose


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.149
  • R-Value Work: 0.123

Literature

Macromolecules
Sequence Display for 1O8S

Classification: HYDROLASE

Total Structure Weight: 17788.46

Macromolecule Entities
Molecule Chains Length Organism Details
PUTATIVE ENDO-XYLANASE A 168 [clostridium] stercorarium EC#: 3.2.1.8 IUBMB
Fragment: CARBOHYDRATE-BINDING DOMAIN, RESIDUES 273-417
Gene Name(s): xynA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BGC
Query on BGC

A BETA-D-GLUCOSE
C6 H12 O6
WQZGKKKJIJFFOK-VFUOTHLCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.149
  • R-Value Work: 0.123
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 36.09 α = 90.00
b = 52.07 β = 90.00
c = 64.74 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-28
  • Released Date: 2003-03-13
  • Deposition author(s): Boraston, A.B., Notenboom, V., Warren, R.A.J., Kilbrun, D.G., Rose, D.R., Davies, G.J.

Revision History

  • 2011-05-08
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance