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STRUCTURE OF ACTIVATED FORM OF PKB KINASE DOMAIN S474D WITH GSK3 PEPTIDE AND AMP-PNP
Biology and Chemistry Report
1O6K
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSFERASE
    Text PROTEIN KINASE, TRANSFERASE, SERINE/THREONINE-PROTEIN KINASE

    Polymeric Molecules

    Chain A
    Description RAC-BETA SERINE/THREONINE PROTEIN KINASE 
    Fragment KINASE DOMAIN, RESIDUES 146-481 
    Mutation YES 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 39122.0 
    Source Method genetically manipulated  
    Entity Name RAC-PK-BETA, PROTEIN KINASE AKT-2, PROTEIN KINASE B, BETA, PKB BETA, PROTEIN KINASE BETA, AKT2 
    Chain C
    Description GLYCOGEN SYNTHASE KINASE-3 BETA 
    Fragment PEPTIDE, RESIDUES 3-12 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 1123.2 
    Source Method genetically manipulated  
    Entity Name GSK-3 BETA 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ANP  PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER  C10 H17 N6 O12 P3   506.20  View 
    MN  MANGANESE (II) ION  Mn   54.94  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A AKT2_HUMAN B2RBD8     
    C GSK3B_HUMAN D3DN89     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc Catalytic Site(s)
    2.7.11.1        
    2.7.11.1        
    2.7.11.26        
     
  •   Gene Details   Hide

    Genetic Source

    Chain C
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Spodoptera frugiperda  
    Host Vector Type Baculovirus


    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Spodoptera frugiperda  
    Host Vector Type Baculovirus


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    3 3q13.3 2932     glycogen synthase kinase 3 beta GSK3B    
    19 19q13.1-q13.2 208     v-akt murine thymoma viral oncogene homolog 2 AKT2    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs55859611 LS-SNP   dbSNP   A 188 I - > V Helix 6% (Buried) 19 40747856
    rs35817154 LS-SNP   dbSNP   A 208 R - > K Coil 59% (Exposed) 19 40745968
    rs145907048 LS-SNP   dbSNP   A 253 R - > Q Helix 10% (Intermediate) 19 40743949
    rs1804324 LS-SNP   dbSNP   A 265 Y - > N Helix 18% (Intermediate) 19 40743914
    rs121434593 LS-SNP   dbSNP   A 274 R - > H Coil 9% (Intermediate) 19 40743886 TPO
    rs140987550 LS-SNP   dbSNP   A 314 P - > L 3/10 Helix 6% (Buried) 19 40742183
    rs144395843 LS-SNP   dbSNP   A 329 R - > W Turn 15% (Intermediate) 19 40741987
    rs145305228 LS-SNP   dbSNP   A 347 R - > C Bend 48% (Exposed) 19 40741933
    rs202125073 LS-SNP   dbSNP   A 347 R - > H Bend 48% (Exposed) 19 40741932
    rs200433217 LS-SNP   dbSNP   A 360 E - > A Helix 46% (Exposed) 19 40741893
    rs144444132 LS-SNP   dbSNP   A 368 R - > C Coil 76% (Exposed) 19 40741870
    rs139506765 LS-SNP   dbSNP   A 372 T - > M Turn 96% (Exposed) 19 40741857
    rs200395003 LS-SNP   dbSNP   A 376 E - > D Helix 34% (Intermediate) 19 40741844
    rs142926499 LS-SNP   dbSNP   A 467 R - > W Coil 44% (Exposed) 19 40739826