1O5O

Crystal structure of Uracil phosphoribosyltransferase (TM0721) from Thermotoga maritima at 2.30 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.167

Literature

Macromolecules
Sequence Display for 1O5O

Classification: TRANSFERASE

Total Structure Weight: 101420.97

Macromolecule Entities
Molecule Chains Length Organism Details
Uracil phosphoribosyltransferase A, B, C, D 221 Thermotoga maritima EC#: 2.4.2.9 IUBMB
Gene Name(s): upp TM_0721
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
U5P
Query on U5P

A, B, C, D URIDINE-5'-MONOPHOSPHATE
C9 H13 N2 O9 P
DJJCXFVJDGTHFX-XVFCMESISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.167
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 134.08 α = 90.00
b = 87.41 β = 115.29
c = 90.83 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-10-03
  • Released Date: 2003-10-14
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

  • 2008-04-26
    Type: Version format compliance
  • 2011-07-13
    Type: Advisory, Version format compliance