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Solution Structure of the Lyase Domain of Human DNA Polymerase Lambda
Biology and Chemistry Report
1NZP
  •   Structure Details   Hide

    Structure Keywords

    Keywords DNA BINDING PROTEIN/TRANSFERASE
    Text DNA POLYMERASE LAMBDA, POL LAMBDA, LYASE DOMAIN, 8 kDa DOMAIN, POL BETA-LIKE, DNA BINDING PROTEIN-TRANSFERASE COMPLEX

    Polymeric Molecules

    Chain A
    Description DNA polymerase lambda 
    Fragment POLYMERASE LAMBDA LYASE DOMAIN(RESIDUES 242 - 327) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 9715.3 
    Source Method genetically manipulated  
    Entity Name Pol Lambda, DNA polymerase Lambda, DNA polymerase beta-2, Pol beta2 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A DPOLL_HUMAN D3DR76     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    2.7.7.7      
    4.2.99      
     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Gene poll
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Blr (de3)
    Host Vector Type Plasmid
    Host Plasmid Name pET30a(+)


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    10 10q23 27343     polymerase (DNA directed), lambda POLL    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs147811477 LS-SNP   dbSNP   A 251 N - > S Coil 32% (Intermediate) 10 103344498
    rs140868797 LS-SNP   dbSNP   A 283 I - > V Helix 8% (Buried) 10 103344403
    rs151004679 LS-SNP   dbSNP   A 300 C - > S Helix 37% (Exposed) 10 103343432
    rs142726673 LS-SNP   dbSNP   A 303 P - > S Turn 78% (Exposed) 10 103343423
    rs201742864 LS-SNP   dbSNP   A 322 L - > V Bend 116% (Exposed) 10 103343366