1NLI

Complex of [E160A-E189A] trichosanthin and adenine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.158

Literature

Macromolecules
Sequence Display for 1NLI

Classification: HYDROLASE

Total Structure Weight: 27317.02

Macromolecule Entities
Molecule Chains Length Organism Details
Ribosome-inactivating protein alpha-trichosanthin A 248 Trichosanthes kirilowii EC#: 3.2.2.22 IUBMB
Mutation: E160A, E189A
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADE
Query on ADE

A ADENINE
C5 H5 N5
GFFGJBXGBJISGV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
ADE N/A in BindingDB
Kd: 260000 nM  BindingMOAD
Kd: 260000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.158
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 37.93 α = 90.00
b = 75.30 β = 90.00
c = 78.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-07
  • Released Date: 2003-01-21
  • Deposition author(s): Shaw, P.C., Wong, K.B., Chan, D.S.B., Williams, R.L.

Revision History

  • 2008-04-29
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance