1N76

CRYSTAL STRUCTURE OF HUMAN SEMINAL LACTOFERRIN AT 3.4 A RESOLUTION


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 1N76

Classification: ANTIMICROBIAL PROTEIN

Total Structure Weight: 76504.91

Macromolecule Entities
Molecule Chains Length Organism Details
LACTOFERRIN A 690 Homo sapiens EC#: 3.4.21 IUBMB
Gene Name(s): LTF Gene View GIG12 LF
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CO3
Query on CO3

A CARBONATE ION
C O3
BVKZGUZCCUSVTD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE
Query on FE

A FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.217
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.05 α = 90.00
b = 97.51 β = 90.00
c = 156.79 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-12
  • Released Date: 2003-02-18
  • Deposition author(s): Kumar, J., Weber, W., Munchau, S., Yadav, S., Singh, S.B., Sarvanan, K., Paramsivam, M., Sharma, S., Kaur, P., Bhushan, A., Srinivasan, A., Betzel, C., Singh, T.P.

Revision History

  • Version 1_0: 2003-02-18

    Type: Initial release

  • Version 1_1: 2008-04-28

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-02-01

    Type: Structure summary

  • Version 1_4: 2017-10-11

    Type: Refinement description