1MV5

Crystal structure of LmrA ATP-binding domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.251

Literature

Macromolecules
Sequence Display for 1MV5

Classification: TRANSPORT PROTEIN

Total Structure Weight: 109490.03

Macromolecule Entities
Molecule Chains Length Organism Details
Multidrug resistance ABC transporter ATP-binding and permease protein A, B, C, D 243 Lactococcus lactis Fragment: ATP-binding domain
Gene Name(s): lmrA LL0711 L116532
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A, C ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ADP
Query on ADP

B, D ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.251
  • Space Group: P 63

Unit Cell:

Length (Å) Angle (°)
a = 141.87 α = 90.00
b = 141.87 β = 90.00
c = 120.96 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-09-24
  • Released Date: 2003-12-02
  • Deposition author(s): Yuan, Y., Chen, H., Patel, D.

Revision History

  • 2008-04-28
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance