1MMB

COMPLEX OF BB94 WITH THE CATALYTIC DOMAIN OF MATRIX METALLOPROTEINASE-8


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Observed: 0.189

Literature

Macromolecules
Sequence Display for 1MMB

Classification: HYDROLASE (METALLOPROTEASE)

Total Structure Weight: 18800.36

Macromolecule Entities
Molecule Chains Length Organism Details
MATRIX METALLOPROTEINASE-8 A 163 Homo sapiens EC#: 3.4.24.34 IUBMB
Fragment: CATALYTIC DOMAIN
Details: MMP-8 IS IDENTICAL TO THE HUMAN NEUTROPHIL, COLLAGENASE
Gene Name(s): MMP8 Gene View CLG1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BAT
Query on BAT

A 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL- L-PHENYLALANINE-N-METHYLAMIDE
BATIMASTAT; BB94 (Synonym)
C23 H31 N3 O4 S2
XFILPEOLDIKJHX-QYZOEREBSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Observed: 0.189
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 33.67 α = 90.00
b = 69.64 β = 90.00
c = 73.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-08-23
  • Released Date: 1996-10-14
  • Deposition author(s): Bode, W., Grams, F.

Revision History

  • Version 1_0: 1996-10-14

    Type: Initial release

  • Version 1_1: 2008-03-03

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance