1MJ8

High Resolution Crystal Structure Of The Fab Fragment of The Esterolytic Antibody MS6-126


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.155

Literature

Macromolecules
Sequence Display for 1MJ8

Classification: IMMUNE SYSTEM

Total Structure Weight: 49550.71

Macromolecule Entities
Molecule Chains Length Organism Details
IMMUNOGLOBULIN MS6-126 L 219 Mus musculus Fragment: Fab Fragment, LIGHT CHAIN
IMMUNOGLOBULIN MS6-126 H 230 Mus musculus Fragment: Fab Fragment, HEAVY CHAIN

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

H, L PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

H GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.155
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 37.02 α = 90.00
b = 138.28 β = 106.11
c = 45.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-08-27
  • Released Date: 2003-09-23
  • Deposition author(s): Ruzheinikov, S.N., Muranova, T.A., Sedelnikova, S.E., Partridge, L.J., Blackburn, G.M., Murray, I.A., Kakinuma, H., Takashi, N., Shimazaki, K., Sun, J., Nishi, Y., Rice, D.W.

Revision History

  • Version 1_0: 2003-09-23

    Type: Initial release

  • Version 1_1: 2008-04-28

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Non-polymer description, Version format compliance