1MER

HIV-1 MUTANT (I84V) PROTEASE COMPLEXED WITH DMP450


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Observed: 0.187

Literature

Macromolecules
Sequence Display for 1MER

Classification: ASPARTYL PROTEASE

Total Structure Weight: 22088.07

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 PROTEASE A, B 99 Human immunodeficiency virus 1 EC#: 3.4.23.16 IUBMB
Mutation: I84V
Gene Name(s): gag-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DMQ
Query on DMQ

A [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO- 5,6-BIS(HYDROXY)-1,3-BIS([(3-AMINO)PHENYL]METHYL)- 4,7-BIS(PHENYLMETHYL)-2H-1,3-DIAZEPINONE
DMP450(INHIBITOR OF DUPONT MERCK) (Synonym)
C33 H36 N4 O3
KYRSNWPSSXSNEP-ZRTHHSRSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
DMQ Ki: 0.28 - 0.34 nM (86 - 98) BindingDB

Ki: 10 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Observed: 0.187
  • Space Group: P 61

Unit Cell:

Length (Å) Angle (°)
a = 62.80 α = 90.00
b = 62.80 β = 90.00
c = 83.50 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-04-11
  • Released Date: 1998-04-15
  • Deposition author(s): Ala, P., Chang, C.-H.

Revision History

  • 2008-03-03
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance