1LP6

Crystal structure of orotidine monophosphate decarboxylase complexed with CMP

  • Classification: LYASE
  • Deposited: 2002-05-07 Released: 2002-08-07
  • Deposition author(s): Wu, N.Pai, E.F.
  • Organism: Archaea
  • Expression System: Escherichia coli
  • Mutation(s): 3

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 1LP6

Classification: LYASE

Total Structure Weight: 50636.05

Macromolecule Entities
Molecule Chains Length Organism Details
orotidine monophosphate decarboxylase A, B 229 Archaea EC#: 4.1.1.23 IUBMB
Mutation: M1L, R101P, N227I
Gene Name(s): pyrF MTH_129
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
C5P
Query on C5P

A, B CYTIDINE-5'-MONOPHOSPHATE
C9 H14 N3 O8 P
IERHLVCPSMICTF-XVFCMESISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.192
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 57.13 α = 90.00
b = 55.66 β = 94.77
c = 65.84 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-05-07
  • Released Date: 2002-08-07
  • Deposition author(s): Wu, N., Pai, E.F.

Revision History

  • Version 1_0: 2002-08-07

    Type: Initial release

  • Version 1_1: 2008-04-28

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance