1LEJ

NMR Structure of a 1:1 Complex of Polyamide (Im-Py-Beta-Im-Beta-Im-Py-Beta-Dp) with the Tridecamer DNA Duplex 5'-CCAAAGAGAAGCG-3'


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 40
  • Conformers Submitted: 11
  • Selection Criteria: Structures with the Least Restraint Violations

Literature

Macromolecules
Sequence Display for 1LEJ

Classification: DNA

Total Structure Weight: 8858.19

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*CP*AP*AP*AP*GP*AP*GP*AP*AP*GP*CP*G)-3' A 13 synthetic
5'-D(*CP*GP*CP*TP*TP*CP*TP*CP*TP*TP*TP*GP*G)-3' B 13 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
P11
Query on P11

A IMIDAZOLE-PYRROLE-BETA ALANINE-IMIDAZOLE- BETA ALANINE-IMIDAZOLE-PYRROLE-BETA ALANINE- DIMETHYLAMINO PROPYLAMIDE
C41 H56 N17 O8
XZTAUBIMIILCRT-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 40
  • Conformers Submitted: 11
  • Selection Criteria: structures with the least restraint violations

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-04-09
  • Released Date: 2002-05-08
  • Deposition author(s): Urbach, A.R., Love, J.J., Ross, S.A., Dervan, P.B.

Revision History

  • 2008-04-28
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance