1L9G

CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE FROM T. MARITIMA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.226

Literature

Macromolecules
Sequence Display for 1L9G

Classification: HYDROLASE

Total Structure Weight: 21980.65

Macromolecule Entities
Molecule Chains Length Organism Details
Conserved hypothetical protein A 192 Thermotoga maritima Gene Name(s): TM_0511 Tmari_0507
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SF4
Query on SF4

A IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-VKOJMFJBAC
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.226
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 60.50 α = 90.00
b = 60.50 β = 90.00
c = 127.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-03-22
  • Released Date: 2003-05-27
  • Deposition author(s): Rajashankar, K.R., Dodatko, T., Thirumuruhan, R.A., Sandigursky, M., Bresnik, A., Chance, M.R., Franklin, W.A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History

  • Version 1_0: 2003-05-27

    Type: Initial release

  • Version 1_1: 2008-04-28

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-11

    Type: Refinement description