1KZK

JE-2147-HIV Protease Complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.09 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.151

Literature

Macromolecules
Sequence Display for 1KZK

Classification: HYDROLASE / HYDROLASE INHIBITOR

Total Structure Weight: 22666.85

Macromolecule Entities
Molecule Chains Length Organism Details
Protease A, B 99 Human immunodeficiency virus EC#: 3.4.23.16 IUBMB
Mutation: Q7K
Gene Name(s): gag-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
JE2
Query on JE2

A (4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2- methylbenzoyl)amino]-4-phenylbutanoyl}-5,5- dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine- 4-carboxamide
JE-2147, AG1776, KNI-764 (Synonym)
C32 H37 N3 O5 S
CUFQBQOBLVLKRF-RZDMPUFOSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000566
Query on PRD_000566
A KNI-764 Peptide-like /
Enzyme inhibitor
Ligand Explorer Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.09 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.151
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 51.20 α = 90.00
b = 58.41 β = 90.00
c = 62.86 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-06
  • Released Date: 2002-04-03
  • Deposition author(s): Reiling, K.K., Endres, N.F., Dauber, D.S., Craik, C.S., Stroud, R.M.

Revision History

  • 2008-04-28
    Type: Version format compliance
  • 2011-07-13
    Type: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary, Version format compliance
  • 2012-12-12
    Type: Other