1KJV

TAP-B-associated rat MHC class I molecule


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.48 Å
  • R-Value Free: 0.191
  • R-Value Work: 0.162

Literature

Macromolecules
Sequence Display for 1KJV

Classification: IMMUNE SYSTEM

Total Structure Weight: 46199.52

Macromolecule Entities
Molecule Chains Length Organism Details
Mature alpha chain of major histocompatibility complex class I antigen (HEAVY CHAIN) A 284 Rattus norvegicus Fragment: extracellular domain, residues 1-276 plus C-terminal His tag
Gene Name(s): RT1.A1(C)
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
beta-2-microglobulin B 100 Rattus norvegicus Fragment: residues 21-119, numbered 2-100
Gene Name(s): B2m
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
peptide NPR P 9 Rattus norvegicus Gene Name(s): Ubqln1 Da41 Plic1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.48 Å
  • R-Value Free: 0.191
  • R-Value Work: 0.162
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 48.40 α = 90.00
b = 50.52 β = 90.00
c = 200.07 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-12-05
  • Released Date: 2002-12-18
  • Deposition author(s): Rudolph, M.G., Stevens, J., Speir, J.A., Trowsdale, J., Butcher, G.W., Joly, E., Wilson, I.A.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance