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The Structure and Evolution of the Major Capsid Protein of a Large, Lipid-containing, DNA virus.
Biology and Chemistry Report
1J5Q
  •   Structure Details   Hide

    Structure Keywords

    Keywords Viral protein
    Text PBCV-1, Major capsid protein of large DNA virus, Vp54, Chlorella virus, Viral protein

    Polymeric Molecules

    Chain A,B
    Description Major capsid protein 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 48200.2 
    Source Method natural source  
    Entity Name VP54 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    HG  MERCURY (II) ION  Hg   200.59  View 
    MAN  ALPHA-D-MANNOSE  C6 H12 O6   180.16  View 
    NAG  N-ACETYL-D-GLUCOSAMINE  C8 H15 N O6   221.21  View 
    NDG  2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE  C8 H15 N O6   221.21  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B MCP_PBCV1 P30328     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    19012   Virion  The Complete Fully Infectious Extracellular Virus Particle. 
    19028   Viral Capsid  The Protein Coat That Surrounds the Infective Nucleic Acid in Some Virus Particles. It Comprises Numerous Regularly Arranged Subunits or Capsomeres. 
    5198   Structural Molecule Activity  The Action of a Molecule That Contributes to the Structural Integrity of a Complex or Assembly Within or Outside a Cell. 


     
  •   Gene Details   Hide

    Natural Source

    Chain A,B
    Scientific Name Paramecium bursaria chlorella virus 1  
    Genus Chlorovirus

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    - - 917865     Major capsid protein A430L