1IZC

Crystal Structure Analysis of Macrophomate synthase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.176

Literature

Macromolecules
Sequence Display for 1IZC

Classification: LYASE

Total Structure Weight: 36384.26

Macromolecule Entities
Molecule Chains Length Organism Details
macrophomate synthase intermolecular Diels-Alderase A 339 Macrophoma commelinae Mutation: I108V
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PYR
Query on PYR

A PYRUVIC ACID
C3 H4 O3
LCTONWCANYUPML-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.176
  • Space Group: P 63 2 2

Unit Cell:

Length (Å) Angle (°)
a = 106.68 α = 90.00
b = 106.68 β = 90.00
c = 120.75 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-10-01
  • Released Date: 2003-04-01
  • Deposition author(s): Ose, T., Watanabe, K., Mie, T., Honma, M., Watanabe, H., Yao, M., Oikawa, H., Tanaka, I.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Derived calculations, Version format compliance